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Conference Papers and Presentations
J. Jang, C. Y. Bae, J. K. Park and J. C. Ye, "Self-reference extended depth-of-field quantitative phase microscopy," in Proc. SPIE Photonic West BIOS, January 2010, San Francisco, CA.
K. H. Jin, K. Lee, J. Ahn and J. C. Ye, " Compressive inverse scattering using ultrashort pulses," in Proc. SPIE-IS&T Electronic Imaging, January 2010, San Jose, CA.
K. H. Jin, O. K. Lee and J. C. Ye, "Compressed sensing pulse-echo mode THz tomography", in Proc. IEEE International Conference on Infrared, Millimeter, and Terahertz Waves (IRMMW-THz), September 2009, Busan, South Korea.
K. E. Jang and J. C. Ye, "Single channel exact 3-D blind image deconvolution from cylinderically symmetic blur kernel (Invited Talk), in Proc. IEEE Engineering in Medicine and Biology Society (EMBC), September 2009, Minnesota, USA.
J. Y. Choi, M. W. Kim, W. Seong and J. C. Ye, "Compressed sensing metal artifact removal in dental CT", in Proc. International Symposium on Biomedical Imaging (ISBI), June 2009, Boston, USA.
H. Jung and J. C. Ye, "Performance evalution of accelerated functional MRI acquisition using compressed sensing", in Proc. International Symposium on Biomedical Imaging (ISBI), June 2009, Boston, USA.
M. W. Kim and J. C. Ye, "Ab Initio Maximum Likelihood Reconstruction of Helical Macromolecules using Electron Microscopy", in Proc. International Symposium on Biomedical Imaging (ISBI), June 2009, Boston, USA.
S. H. Tak and J. C. Ye, "Quantification of CMRO2 and CBF using simultaneous NIRS and fMRI", in Proc. International Society for Magnetic Resonance in Medicine (ISMRM), April 2009, Honolulu, USA.
H. Jung and J. C. Ye, "Motion estimated and compensated compressive sensing dynamic MRI under field inhomogeneity", in Proc. International Society for Magnetic Resonance in Medicine (ISMRM), April 2009, Honolulu, USA.
J. C. Ye, "Compressed sensing for Bio-Imaging Applications", in Proc. International Forum on Medical Imaging in Asia (IFMIA), January 2009, Taipei, Taiwan.
J. C. Ye, S. Y. Lee, and Y. Bressler, "Exact Reconstruction Formula for Diffuse Optical Tomography Using Simultaneous Sparse Representation," in Proc. IEEE International Symposium on Biomedical Imaging (ISBI), May 2008, Paris, France.
S. H. Tak, K. E. Jang, J. W. Jung, J. Jang, and J. C. Ye, "General Linear Model and Inference for Near Infrared Spectroscopy Using Global Confidence Region Analysis," in Proc. IEEE International Symposium on Biomedical Imaging (ISBI), May 2008, Paris, France.
H. Jung and J. C. Ye, "High resolution dynamic MRI using estimated and compensated compressed sensing," in Proc. IEEE International Symposium on Biomedical Imaging (ISBI), May 2008, Paris, France.
H. Jung and J. C. Ye, "Optimizing k-t BLAST/SENSE using FOCUSS and RIGR," in Proc. International Society for Magnetic Resonance in Medicine (ISMRM), May 2008, Toronto, Canada.
J. C. Ye and S. Y. Lee, "Non-iterative exact inverse scattering using simultaneous orthogonal matching pursuit (S-OMP)," in Proc. IEEE Conf. on Speech, Acostics and Signal Processing (ICASSP), March 2008, Las Vegas, Nevada.
M. W. Kim, J. Y. Choi, and J. C. Ye, "3D macromolecule structure reconstruction from electron micrograph by exploiting symmetry and sparsity," in Proc. SPIE-IS&T Electronic Imaging, January 2008, San Jose, CA.
J. Jang, and J. C. Ye, "Multi-view optical tomography using L1 data fidelity and sparsity constraint," in Proc. SPIE Photonic West BIOS, January 2008, San Jose, CA.
S. H. Tak, K. E. Jang, J. W. Jung, J. Jang, Y. Jeong, and J. C. Ye, "NIRS-SPM: Statistical parametric mapping for near infrared spectroscopy," in Proc. SPIE Photonic West BIOS, January 2008, San Jose, CA.
K. E. Jang, S. H. Tak, J. Jang, J. W. Jung, and J. C. Ye, "Wavelet-MDL based detrending method for near infrared spectroscopy (NIRS)," in Proc. SPIE Photonic West BIOS, January 2008, San Jose, CA.
J. W. Jung, S. H. Tak, J. Jang, Y. Jeong, and J. C. Ye, "Non-invasive measurement of brain activity using near-infrared spectroscopy," in Proc. IEEE Inter. Conf. on Information Acquisition(ICIA), July 2007, Jeju, Korea.
J. C. Ye, S. H. Tak, K. E. Jang, and J. W. Jung, "Toward statistical parametric mapping for near-infrared optical spectroscopy(SPM-NIRS)," in Proc. 9th China-India-Japan-Korea Joint Workshop on Neurobiology and Neuroinformatics (NBNI), July 2007, Korea.
J. C. Ye, K. E. Jang, S. H. Tak, and J. W. Jung, "Wavelet-based estimation of a bias and generalized linear model for near-infrared spectroscopy," in Proc. 9th China-India-Japan-Korea Joint Workshop on Neurobiology and Neuroinformatics (NBNI), July 2007, Korea.
J. H. Yoo and J. C. Ye, "Radial k-t FOCUSS : k-t space FOcal Underdetermined System Solver for Projection Reconstruction MRI, in Proc. International Society for Magnetic Resonance in Medicine (ISMRM), May 2007, Berlin, Germany.
H. Jung and J. C. Ye, "Improved k-t BLASE using FOCUSS, in Proc. International Society for Magnetic Resonance in Medicine (ISMRM), May 2007, Berlin, Germany.
S. H. Tak, Y. J. Han, H. W. Park, and J. C. Ye, "Projection Reconstruction MR Imaging using FOCUSS, in Proc. International Society for Magnetic Resonance in Medicine (ISMRM), May 2007, Berlin Germany.
K. E. Jang and J. C. Ye, "Single channel blind image deconvolution from radially symmetric FIR blur,in Proc. IEEE International Symposium on Biomedical Imaging (ISBI), April 2007, Arlington VA.
H. Jung, J. H. Yoo, and J. C. Ye, "Generalized k-t BLAST and k-t SENSE using FOCUSS, in Proc. IEEE International Symposium on Biomedical Imaging (ISBI), April 2007, Arlington VA.
J. Y. Choi, S. Gupta, I. Park, D. Lee, and J. C. Ye, "Breast cancer diagnosis from fluorescence spectroscopy using support vector machine, in Proc. SPIE, Photonic West BIOS, January 2007, San Jose, CA.
M. W. Kim, J. Y. Choi, L. Yu, K. E. Lee, S. S. Han, and J. C. Ye, "Cryo-EM microscopy single particle reconstruction of virus particles using compressed sensing theory, in Proc. IS&T/SPIE, Computational Imaging, January, 2007, San Jose, CA.
S. H. Tak, J. H. Yoo, and J. C. Ye, "Super-Resolution Projection Reconstruction MR Imaging using FOCUSS (PR-FOCUSS), in Proc. SPIE-IS&T Electronic Imaging, January 2007, San Jose, CA.
J. C. Ye and J. H. Kim, "x-f SENSE: Optimal Spatio-Temporal Sampling for Dynamic MRI using Multiple Coils," in Proc. Radiological Society of North America (RSNA), November 2006, Chicago, IL.
Y. Liu and J. C. Ye, "Comparative study of projection/back-projection schemes in cryo-EM tomography," in Proc. SPIE International Symposium on Optical Science and Technology (Image Reconstruction and Incomplete Data), September 2006.
J. H. Kim, J. H. Yoo, and J. C. Ye, "Noise Variance Analysis of an Optimal Spatio-Temporal Encoding Scheme for Dynamic MRI using Phase Array Coils," in Proc. World Congress on Medical Physics and Biomedical Engineering, August 2006, Seoul Korea.
J. W. Jung, J. Jang, H. S. Kim, and J. C. Ye, "3-D Microscopy Tomography under Sparsity Constraint," in Proc. World Congress on Medical Physics and Biomedical Engineering, August 2006, Seoul, Korea.
K. E. Jang and J. C. Ye, "Radon Domain CTF Correction for Cryo-Electron Microscopy," in Proc. World Congress on Medical Physics and Biomedical Engineering, August 2006, Seoul, Korea.
J. H. Kim, J. C. Ye, and J. H. Yoo, "X-F SENSE: optimal spatio-temporal sensitivity encoding for dynamic MR imaging, in Proc. IEEE Int. Symposium on Biomedical Imaging (ISBI), April 2006, Arlington, Virginia.
S. Gupta and J. C. Ye, "Polarization Based Optical Sectioning of Multilayer Cell Patterns," in Proc. SPIE, Photonics West, BIOS , January 2006, San Jose, CA.
J. C. Ye, P. Moulin, and Y. Bresler, "Asymptotic global confidence regions for 3-D parametric shape estimation in inverse problems, in Proc. IEEE Workshop on Statistical Signal Processing, July 2005, Bordeaux, France.
J. C. Ye, K. Webb, R. Millane, and C. Bouman, "In vivo optical molecular imaging: principles and signal processing issues, in Proc. IEEE Conf. on Speech, Acostics and Signal Processing (ICASSP), March 2005, Philadelphia, PA.
J. C. Ye, Y. Bresler, and P. Moulin, "Fundamental uncertainty in estimating 3-D parametric surfaces for imaging applications," Image and Vision Computing, New Zealand, November, 2004.
J. C. Ye and M. van der Schaar, "Fully scalable 3D overcomplete wavelet video coding using adaptive motion compensated temporal filtering, in Proc. Visual Communications and Image Processing (VCIP), 2003.
J. C. Ye and M. van der Schaar, "Transcaling for efficient end-to-end streaming over the Internet and wireless networks using adaptive overcomplete wavelet video coding," in Proc. Visual Communications and Image Processing(VCIP), 2003.
J. C. Ye and Y. Chen, "Rate-distortion optimized data partitioning of video using backward adaptation,in Proc. IEEE International Conf. on Acostics, Speech, and Signal Processing, (ICASSP), 2003.
J. C. Ye, Y. Bresler, and P. Moulin, "Cramer-Rao bound for parametric shape estimation in inverse problems", in Proc. IEEE International Conf. on Image Processing (ICIP), 2002.
J. C. Ye, Y. Bresler, and P. Moulin, "A self-referencing level-set method for image reconstruction from sparse Fourier samples, in Proc. IEEE International Conf. on Image Processing (ICIP), 2001.
J. C. Ye, Y. Bresler and P. Moulin, "A self-referencing level-set method for image reconstruction from sparse Fourier samples," in Proc. IEEE Workshop on Variational and Level Set Methods in Computer Vision, 2001.
J. C. Ye, Y. Bresler, and P. Moulin, "Global confidence regions in parametric shape estimation," in ICASSP 2000, Turkey.
R. P. Millane, C. A. Bouman, K. J. Webb and J. C. Ye, "Multigrid Bayesian method for optical diffusion tomography," in Proc. SPIE Annual meeting, 2000 (invited paper).
K. J. Webb, J. C. Ye, C. A. Bouman, and R. P. Millane, "Optical diffusion imaging using nonlinear multigrid optimization", in Conference on Lasers and Electrooptics (CLEO), September 2000, Nice, France.
K. J. Webb, J. C. Ye, C. A. Bouman, and R. P. Millane, "Nonlinear multigrid optimization for soft tissue imaging using a Bayesian optical diffusion approach", in NIH/OSA conference, 2000 (invited paper).
J. C. Ye, C. A. Bouman, R. P. Millane, and K. J. Webb, "Nonlinear multigrid optimization for Bayesian diffusion tomography", in Proc. IEEE International Conf. on Image Processing (ICIP), October 1999, Kobe.
R. P. Millane, J. C. Ye, C. A. Bouman, and K. J. Webb, "Efficient algorithms for Bayesian optical diffusion imaging", in Proc. Image and Vision Computing New Zealand, D. Pairman and H. North (eds.), Landcare Research, Lincoln, NZ, 223-228 , 1999.
J. C. Ye, C. A. Bouman, K. J. Webb, and R. P. Millane, "Bayesian optical diffusion imaging,", in Proc. SPIE, July, 1999, Denver.
J. C. Ye, C. A. Bouman, and K. J. Webb, "A localized relaxation algorithm for Bayesian diffusion tomography using the generalized Gaussian Markov random field prior model," '98 OSA Annual meeting, 1998, Baltimore USA.
J. C. Ye, K. J. Webb, R. P. Millane, and T. J. Downar, "Unified parameter estimation algorithm for diffusion imaging using the optimal search," '98 OSA Annual meeting, 1998, Baltimore USA.
J. C. Ye, K. J. Webb, R. P. Millane, and T. J. Downar, "Optimal parameter updating for optical imaging," IEEE International Conf. on Image Processing (ICIP), October 1998, Chicago USA.
J. C. Ye, R. P. Millane, K. J. Webb, and T. J. Downar, "The effect of the "grad(D)" term in optical diffusion imaging," OSA Signal Recovery and Synthesis Topical Meeting, June 1998, Kona, Hawaii.
J. C. Ye, K. J. Webb, R. P. Millane, and T. J. Downar, "A weighted distorted Born iterative method for optical diffusion imaging," '97 OSA Annual meeting, October 1997, Long Beach, CA.
J. C. Ye, K. J. Webb, T. J. Downar, and R. P. Millane, "Weighted cost function reconstruction in optical diffusion imaging," in Proc. SPIE Symp. on Signal and Image Proc., July 1997, San Diego, CA.
C. S. Park, J. C.Ye, and S. W. Lee, "Lost motion vector recovery algorithm," in Proc. IEEE International Symposium on Circuits and Systems (ISCAS), May 1994, London, U.K..